BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037H09SP1|AL430459
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig447 1625 0.0
>3x_Contig447
Length = 1630
Score = 1625 bits (816), Expect = 0.0
Identities = 840/851 (98%), Gaps = 1/851 (0%)
Strand = Plus / Minus
Query: 1 ctttgagcttggtgctgattagattttgaatatttatttgggatctgtgaaccaggtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ctttgagcttggtgctgattagattttgaatatttatttgggatctgtgaaccaggtgga 792
Query: 61 ggcgaaaaggacatttgggtgagaacgactaacgagttatatttacagatagcctaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ggcgaaaaggacatttgggtgagaacgactaacgagttatatttacagatagcctaacaa 732
Query: 121 tggagatgatgtttccatacagtctattgttggatttagccactgtgtttacaatatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tggagatgatgtttccatacagtctattgttggatttagccactgtgtttacaatatatg 672
Query: 181 tttaatattattatgcagattcgatttgtctgcaaagcccttttttaaatgatagaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tttaatattattatgcagattcgatttgtctgcaaagcccttttttaaatgatagaatta 612
Query: 241 tggagctttttgcaatcacaggaccaaaaattaatgagaacgacagatataagagtaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggagctttttgcaatcacaggaccaaaaattaatgagaacgacagatataagagtaaaa 552
Query: 301 tgcacaaaaatatagatgtcaaaatacaagcacaaagtgccggtaatacattagtatacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgcacaaaaatatagatgtcaaaatacaagcacaaagtgccggtaatacattagtatacg 492
Query: 361 amatcagatcgggaaagagtaagtatagggtttatttggcccaatcatttagtgctttca 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaatcagatcgggaaagagtaagtatagggtttatttggcccaatcatttagtgctttca 432
Query: 421 aactatgaattaatgtaaatacgcaatagttcttgaacatctcttactatgaaaatmaag 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 431 aactatgaattaatgtaaatacgcaatagttcttgaacatctcttactatgaaaataaag 372
Query: 481 tggaagattagtgtaacgntaataataamagattacatgaccatgatagtttaaaaataa 540
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 371 tggaagattagtgtaacgataataataaaagattacatgaccatgatagtttaaaaataa 312
Query: 541 gtataagtcaaamtgaggtacaaaatatgagaattaataataammacatgttagcgaaag 600
|||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 311 gtataagtaaaaatgaggtacaaaatatgagaattaataataaaaacatgttagcgaaag 252
Query: 601 atgcgatcgtgcatatgaatacgacagacaaacagccggaaacactcgagatctgccaaa 660
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 251 atgcgatcgtgcatatgaatacgacagaaaaacagccggaaacactcgagatctgcaaaa 192
Query: 661 ctggtaacaaacgatcttcaacttatgtgttcaatttttgatttataattgggctcaacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ctggtaacaaacgatcttcaacttatgtgttcaatttttgatttataattgggctcaacg 132
Query: 721 aaaaccagttcctggaaacggttatcaagattttcctacctcattgacaagcatagttgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aaaaccagttcctggaaacggttatcaagattttcctacctcattgacaagcatagttgg 72
Query: 781 gggtgtt-acaaaattttgatgagataattcgtggttcggtattccatgttctttattca 839
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gggtgttaacaaaattttgatgagataattcgtggttcggtattccatgttctttattca 12
Query: 840 tatatgtgaaa 850
|||||||||||
Sbjct: 11 tatatgtgaaa 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6896
Number of Sequences: 1807
Number of extensions: 6896
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)